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5-(Octa-1,7-diynyl)-2'-deoxycytidine 5'-triphosphate, Sodium salt

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CLK-T06-S 5 μl (100 mM) 149,10 Add to Basket/Quote Add to Notepad
CLK-T06-L 5 x 5 μl (100 mM) 596,50 Add to Basket/Quote Add to Notepad
CLK-T06-XL 50 μl (100 mM) 894,70 Add to Basket/Quote Add to Notepad
Structural formula of C8-Alkyne-dCTP (5-(Octa-1,7-diynyl)-2'-deoxycytidine 5'-triphosphate, Sodium salt)
Structural formula of C8-Alkyne-dCTP

For general laboratory use.

Shipping: shipped on gel packs

Storage Conditions: store at -20 °C
Short term exposure (up to 1 week cumulative) to ambient temperature possible.

Shelf Life: 12 months after date of delivery

Molecular Formula: C17H24N3O13P3 (free acid)

Molecular Weight: 571.31 g/mol (free acid)

Exact Mass: 571.05 g/mol (free acid)

Purity: ≥ 95 % (HPLC)

Form: solution in water

Color: colorless to slightly yellow

Concentration: 100 mM

pH: 7.5

Spectroscopic Properties: ε260 nm 7.3 L mmol-1 cm-1 (in water), ε292 nm 9.5 L mmol-1 cm-1 (in water)

Incorporation into DNA by PCR with family B polymerases (Pwo, Deep Vent exo- or KOD XL)[1,2]
Incorporation into DNA by Primer Extension with family A polymerase Taq and family B polymerases (Pwo, Deep Vent exo- or KOD XL)[1]
Incorporation into DNA by 3'-End Labeling with Terminal deoxynucleotidyl Transferase(TdT)[3]
The resulting ethynyl-functionalized DNA can subsequently be processed via Cu(I)-catalyzed click chemistry that offers the choice

  • to introduce a Biotin group (via Azides of Biotin) for subsequent purification tasks
  • to introduce fluorescent group (via Azides of fluorescent dyes) for subsequent microscopic imaging
  • to crosslink the DNA to Azide-functionalized biomolecules e.g.proteins
Presolski et al.[4] and Hong et al.[5] provide a general protocol for Cu(I)-catalyzed click chemistry reactions that may be used as a starting point for the set up and optimization of individual assays.

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BIOZ Product Citations:
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Selected References:
[1] Gierlich et al. (2007) Synthesis of Highly Modified DNA by a Combination of PCR with Alkyne-Bearing Triphosphates and Click Chemistry. Chem. Eur. J. 13:9486.
[2] Burley et al. (2006) Directed DNA Metallization. J. Am. Chem. Soc. 128 (5):1398.
[3] Sorensen et al. (2013) Enzymatic Ligation of Large Biomolecules to DNA. ACSnano 7 (9):8098.
[4] Presolski et al. (2011) Copper-Catalyzed Azide-Alkyne Click Chemistry for Bioconjugation. Current Protocols in Chemical Biology 3:153.
[5] Hong et al. (2011) Analysis and Optimization of Copper-Catalyzed Azide-Alkyne Cycloaddition for Bioconjugation. Angew. Chem. Int. Ed. 48:9879.