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Kits for (m)RNA Synthesis (unmodified & nucleoside base-modified)

In vitro synthesis of RNA (> 100 nt up to several thousand nt) is catalyzed by bacteriophage RNA polymerases using linear double-stranded DNA (dsDNA) as template (in vitro transcription).

Wildtype T7 RNA polymerase is the most efficient and widely used RNA polymerase however, challenges persist e.g. heterogeneity at the 3'-and 5'-end of RNA products as well as and high level of double-stranded RNA (dsRNA) by-products [1-8]. These challenges can be addressed by modified T7 RNA Polymerases that are available in a convenient ready-to-use kit configuration (Tab. 1).

The biological functionality of in vitro transcribed mRNA can be further increased by 5'-capping and nucleoside base modifications which significantly increase translation efficiency while reducing immunogenicity [9-24]. Such modifications are conveniently introduced by correspondingly modified nucleotides via T7 RNA polymerase-mediated in vitro transcription (Tab. 2). The optimal combination of 5’ capping and nucleoside base modification(s) however, needs to be individually determined for each mRNA target. Initial comparative studies can conveniently be performed with our HighYield T7 mRNA Testkits: HighYield T7 mRNA Modification Testkit.


Table 1: HighYield Kits for efficient synthesis of unmodified (m)RNA

Product Features Yield after 30 min at 37 °C* Yield after 2 h at 37 °C*
HighYield T7 RNA Synthesis Kit
  • Based on wildtype T7 RNA Polymerase
  • Traditional variant
140 -160 µg 140 -160 µg
HighYield T7 P&L RNA Synthesis Kit
  • Based on T7 P&L RNA Polymerase
  • Associated with decreased abortive transcription[6], increased 5‘ homogeneity[7] and increased 5‘ incorporation efficiency of GTP analogs[8]
140 -160 µg 140 -160 µg
HighYield T7 PURE RNA Synthesis Kit 100 -120 µg 140 -160 µg
HighYield T7 Enzyme Testkit
  • Contains HighYield T7, HighYield T7 P&L and HighYield T7 PURE RNA Poymerase Mix
  • Designed to find the optimal RNA Polymerase Mix for a specific application
* reaction conditions: 1 µg DNA template (1400 nt RNA transcript), 7.5 mM each unmodified NTPs, 1x HighYield T7 Reaction Buffer, 2 µl each HighYield T7 WT, T7 PURE or T7 P&L RNA Polymerase Mix. Incubation for 30 min and 2 h at 37 °C. Read out: Fluorescence microplate assay.

Table 2: HighYield Kits for efficient synthesis of nucleoside base-modified (m)RNA

Products & Ordering

Selected References

[1] Shen et al. (2205) A review of advances in in vitro RNA preparation by ssRNAP. Int. J. Biol. Macromol.302(2):141002.
[2] Nelson et al. (2020) Impact of mRNA chemistry and manufacturing process on innate immune activation. Sci.Adv. 6:eaaz6893.
[3 Mu et al. (2018) An origin of the immunogenicity of in vitro transcribed RNA. Nucleic Acids Res. 46 (10):5239.
[4] Karikó et al. (2011) Generating the optimal mRNA for therapy: HPLC purification eliminates immune activation and improves translation of nucleoside-modified, protein-encoding mRNA. Nucleic Acids Res. 39 (21):e142.
[5] Baiersdörfer et al. (2019) A Facile Method for the Removal of dsRNA Contaminant from In Vitro-Transcribed mRNA. Ther. Nucleic Acids 15:26.
[6] Guillerez et al. (2005) A mutation in T7 RNA polymerase that facilitates promoter clearance. Natl. Acad. Sci. U.S.A102:5958.
[7] Salvail-Lacoste et al. (2018) Affinity purification of T7 RNA transcripts with homogeneous ends using ARiBo and CRISPR tags. RNA19:1003.
[8] Lyon et al. (2018) A T7 RNA Polymerase Mutant Enhances the Yield of 5'-Thienoguanosine-Initiated RNAs. ChemBioChem19:142.
[9] Karikó et al.(2005) Suppression of RNA Recognition by Toll-like Receptors: The Impact of Nucleoside Modification and the Evolutionary Origin of RNA. Immunity23:165.
[10] Karikó et al.(2008) Incorporation of Pseudouridine into mRNA Yields Superior Nonimmunogenic Vector With Increased Translational Capacity and Biological Stability. Mol. Ther.16(11):1833.
[11] Kormann et al.(2011) Expression of therapeutic proteins after delivery of chemically modified mRNA in mice. Nature Biotechnology29(2):154.
[12] Warren et al.(2011) Highly Efficient Reprogramming to Pluripotency and Directed Differentiation of Human Cells with Synthetic Modified mRNA. Cell Stem Cell7:618.
[13] Svitkin et al.(2017) N1-methyl-pseudouridine in mRNA enhances translation through eIF2alpha-dependent and independent mechanisms by increasing ribosome density. Nucleic Acid Res45(10):6023.
[14] Andies et al.(2015) N1-methylpseudouridine-incorporated mRNA outperforms pseudouridine-incorporated mRNA by providing enhanced protein expression and reduced immunogenicity in mammalian cell lines and mice. J. Control. Release217:337.
[15] Li et al.(2016) Effects of Chemically Modified Messenger RNA on Protein Expression. Bioconjugate Chem.27:849.
[16] Arango et al.(2018) Acetylation of Cytidine in mRNA Promotes Translation Efficiency. Cell175(7):1872.
[17] Sinclair et al.(2017) Profiling Cytidine Acetylation with Specific Affinity and Reactivity. ACS Chem. Neurosci.12(12):2922.
[18] Dominissini et al.(2016) The dynamic N1-methyladenosine methylome in eukaryotic messenger RNA. Nature530:441.
[19] Wienert et al. (2018) In vitro transcribed guide RNAs trigger an innate immune response via RIG-I pathway. PLoS Biol. 16 (7) :e2005840.
[20] Kim et al. (2018) CRISPR RNAs trigger innate immune responses in human cells. Genome Res. 28 (3):367.
[21] Badieyan et al. (2019) Concise Review: Application of Chemically Modified mRNA in Cell Fate Conversion and Tissue Engineering. Stem Cells Translational Medicine8:833.
[22] Hadas et al. (2019) Optimizing Modified mRNA In Vitro Synthesis Protocol for Heart Gene Therapy. Molecular Therapy: Methods & Clinical Development 14:300.
[23] Shatkinet al. (1976) Capping of eukaryotic mRNAs. Cell 9(4):645.
[24] Gallowayet al.(2019) mRNA cap regulation in mammalian cell function and fate. Biochimica et Biophysica Acta 1862(3):270.