The general nucleoside polyphosphate formula is pnNpn where p is a phosphate chain of the length n and N a ribo- or deoxy-nucleoside.
| 5‘-monophosphate | 5‘-diphosphate | 5‘-triphosphate | |
|---|---|---|---|
| 3‘-monophosphate | 3‘,5‘-pGp | ||
| 3‘,5‘-pAp 2‘-OMe-3‘,5‘-pAp Amine-labeled 3‘,5‘-pAp 8-Br-3‘,5‘-pAp Fluorescent 3‘,5‘-pAp |
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| 3‘,5‘-pCp Amine-labeled 3‘,5‘-pCp Azide-labeled 3‘,5‘-pCp Alkyne-labeled 3‘,5‘-pCp Biotinylated 3‘,5‘-pCp Desthiobiotinylated 3‘,5‘-pCp Fluorescent 3‘,5‘-pCp |
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| 3‘-diphosphate | 3‘,5‘-ppGpp 3‘,5‘-ppApp |
3‘,5‘-pppGpp 3‘,5‘-pppApp |
|
| 3‘-triphosphate | 2‘,5‘-pGp | ||
| 2‘,5‘-pAp Amine-labeled 2‘,5‘-pAp 8-Br-2‘,5‘-pAp Fluorescent 2‘,5‘-pAp |
