structural analog to Alexa Fluor® 647
5-(3-Aminoallyl)-2'-deoxyuridine-5'-triphosphate, labeled with AZDye 647, Triethylammonium salt
| Cat. No. | Amount | Price (EUR) | Buy / Note |
|---|---|---|---|
| NU-803-XX-AZ647-S | 10 μl (1 mM) | 135,70 | Add to Basket/Quote Add to Notepad |
| NU-803-XX-AZ647-L | 5 x 10 μl (1 mM) | 536,20 | Add to Basket/Quote Add to Notepad |
For general laboratory use.
Please centrifuge briefly before opening (volume ≤2 ml).
Shipping: shipped on gel packs
Storage Conditions: store at -20 °C
Short term exposure (up to 1 week cumulative) to ambient temperature possible.
Shelf Life: 12 months after date of delivery
Molecular Formula: C61H88N7O29P3S4 (free acid)
Molecular Weight: 1604.56 g/mol (free acid)
Exact Mass: 1603.37 g/mol (free acid)
Purity: ≥ 95 % (HPLC)
Form: solution in 10 mM Tris-HCl
Color: blue
Concentration: 1.0 mM - 1.1 mM
pH: 7.5 ±0.5
Spectroscopic Properties: λexc 648 nm, λem 671 nm, ε 270.0 L mmol-1 cm-1 (Tris-HCl pH 7.5)
Applications:
Incorporation into DNA/cDNA by
- PCR with Taq polymerase in-house data
- Nick Translation with DNAse I/ DNA Polymerase I in-house data
Description:
Aminoallyl-dUTP-XX-AZDye647 is recommended for direct enzymatic labeling of DNA/cDNA e.g. by PCR and Nick Translation. It is incorporated as substitute for its natural counterpart dTTP. The resulting Dye-labeled DNA/cDNA probes are ideally suited for fluorescence hybridization applications such as FISH or microarray-based gene expression profiling.Optimal substrate properties and thus labeling efficiency is ensured by an optimized linker attached to the C5 position of uridine. AZDye 647 (structural analog to Alexa Fluor 647®) is a hydrophilic dye with excellent photostability compared to fluorescein.
Recommended Aminoallyl-dUTP-XX-AZDye647/dTTP ratio for PCR and Nick Translation: 30-50% Aminoallyl-dUTP-XX-AZDye647/ 70-50% dTTP
Please note: Protect the Dye-labeled dUTP from exposure to light and carry out experimental procedures in low light conditions. The optimal final concentration of the Dye-labeled dUTP may very depending on the application and assay conditions. For optimal product yields and high incorporation rates an individual optimization of the Dye-labeled-dUTP/dTTP ratio is recommended.
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